No. words: 1091; after pruning: 1065


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.8 (1,1:484)  406  0.68 0.00 0.23  BE490744Ld02P067F02P067F081F1_055.ab1        1   439 (1)  C BE490744Ld02P067F02P067F081R1_055.ab1   (167)   484    47 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C BE490744Ld02P067F02P067F081R1_055.ab1   651 
  171    BE490744Ld02P067F02P067F081F1_055.ab1     4 
  179  C BE490744Ld02P067F02P067F081R1_055.ab1   473 
  226    BE490744Ld02P067F02P067F081F1_055.ab1    60 
  234  C BE490744Ld02P067F02P067F081R1_055.ab1   418 
  238    BE490744Ld02P067F02P067F081F1_055.ab1    72 
  242  C BE490744Ld02P067F02P067F081R1_055.ab1   410 
  262    BE490744Ld02P067F02P067F081F1_055.ab1    96 
  278  C BE490744Ld02P067F02P067F081R1_055.ab1   374 
  302    BE490744Ld02P067F02P067F081F1_055.ab1   136 
  306  C BE490744Ld02P067F02P067F081R1_055.ab1   346 
  326    BE490744Ld02P067F02P067F081F1_055.ab1   160 
  330  C BE490744Ld02P067F02P067F081R1_055.ab1   322 
  438    BE490744Ld02P067F02P067F081F1_055.ab1   272 
  446  C BE490744Ld02P067F02P067F081R1_055.ab1   206 
  458    BE490744Ld02P067F02P067F081F1_055.ab1   292 
  470  C BE490744Ld02P067F02P067F081R1_055.ab1   182 
  510    BE490744Ld02P067F02P067F081F1_055.ab1   344 
  514  C BE490744Ld02P067F02P067F081R1_055.ab1   138 
  558    BE490744Ld02P067F02P067F081F1_055.ab1   392 
  562  C BE490744Ld02P067F02P067F081R1_055.ab1    90 
Contig length: old 651, new 651

Contig length: old 651, new 651
New start: 0