No. words: 692; after pruning: 666


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 2.7 (1,1:494)  141  1.86 0.00 0.00  BE490744Ld06P067F02P067F081F1_064.ab1        1   161 (1)  C BE490744Ld06P067F02P067F081R1_064.ab1   (35)   495   335 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  74 nodes

 39 str. conn. components

Path
    1  C BE490744Ld06P067F02P067F081R1_064.ab1   530 
   39    BE490744Ld06P067F02P067F081F1_064.ab1     4 
   51  C BE490744Ld06P067F02P067F081R1_064.ab1   480 
   84    BE490744Ld06P067F02P067F081F1_064.ab1    49 
   88  C BE490744Ld06P067F02P067F081R1_064.ab1   443 
   92    BE490744Ld06P067F02P067F081F1_064.ab1    57 
  112  C BE490744Ld06P067F02P067F081R1_064.ab1   419 
Contig length: old 530, new 530

Contig length: old 530, new 530
New start: 0