No. words: 1032; after pruning: 1006


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:494)  448  0.00 0.21 0.41  BE490744Tu02P067F02P067F081F1_074.ab1        1   485 (0)  C BE490744Tu02P067F02P067F081R1_074.ab1   (53)   494    11 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C BE490744Tu02P067F02P067F081R1_074.ab1   547 
   65    BE490744Tu02P067F02P067F081F1_074.ab1    12 
   73  C BE490744Tu02P067F02P067F081R1_074.ab1   475 
   85    BE490744Tu02P067F02P067F081F1_074.ab1    32 
  133  C BE490744Tu02P067F02P067F081R1_074.ab1   415 
  404    BE490744Tu02P067F02P067F081F1_074.ab1   352 
  412  C BE490744Tu02P067F02P067F081R1_074.ab1   136 
  452    BE490744Tu02P067F02P067F081F1_074.ab1   400 
  456  C BE490744Tu02P067F02P067F081R1_074.ab1    92 
Contig length: old 547, new 547

Contig length: old 547, new 547
New start: 0