No. words: 1801; after pruning: 1775


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.0 (1,1:940)  833  0.23 0.12 0.12  BE494330As01P129G04P129H101F1_083.ab1       43   902 (0)  C BE494330As01P129G04P129H101R1_083.ab1   (0)   899    40 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  426 nodes

 215 str. conn. components

Path
    1    BE494330As01P129G04P129H101F1_083.ab1     1 
  666  C BE494330As01P129G04P129H101R1_083.ab1   276 
Contig length: old 941, new 941

Contig length: old 941, new 941
New start: 0