No. words: 1783; after pruning: 1757


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.9 (1,1:940)  817  0.36 0.12 0.00  BE494330At01P129G04P129H101F1_094.ab1       38   878 (0)  C BE494330At01P129G04P129H101R1_094.ab1   (0)   905    64 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  406 nodes

 205 str. conn. components

Path
    1    BE494330At01P129G04P129H101F1_094.ab1     1 
  102  C BE494330At01P129G04P129H101R1_094.ab1   841 
  114    BE494330At01P129G04P129H101F1_094.ab1   113 
  166  C BE494330At01P129G04P129H101R1_094.ab1   777 
  174    BE494330At01P129G04P129H101F1_094.ab1   173 
  178  C BE494330At01P129G04P129H101R1_094.ab1   765 
  182    BE494330At01P129G04P129H101F1_094.ab1   181 
  214  C BE494330At01P129G04P129H101R1_094.ab1   729 
  218    BE494330At01P129G04P129H101F1_094.ab1   217 
  222  C BE494330At01P129G04P129H101R1_094.ab1   721 
  226    BE494330At01P129G04P129H101F1_094.ab1   225 
  250  C BE494330At01P129G04P129H101R1_094.ab1   693 
  258    BE494330At01P129G04P129H101F1_094.ab1   257 
  634  C BE494330At01P129G04P129H101R1_094.ab1   309 
  654    BE494330At01P129G04P129H101F1_094.ab1   653 
  658  C BE494330At01P129G04P129H101R1_094.ab1   285 
  686    BE494330At01P129G04P129H101F1_094.ab1   685 
  700  C BE494330At01P129G04P129H101R1_094.ab1   243 
  704    BE494330At01P129G04P129H101F1_094.ab1   703 
  708  C BE494330At01P129G04P129H101R1_094.ab1   235 
  740    BE494330At01P129G04P129H101F1_094.ab1   739 
  744  C BE494330At01P129G04P129H101R1_094.ab1   199 
  752    BE494330At01P129G04P129H101F1_094.ab1   751 
  756  C BE494330At01P129G04P129H101R1_094.ab1   187 
  764    BE494330At01P129G04P129H101F1_094.ab1   763 
  768  C BE494330At01P129G04P129H101R1_094.ab1   175 
  772    BE494330At01P129G04P129H101F1_094.ab1   771 
  776  C BE494330At01P129G04P129H101R1_094.ab1   167 
  780    BE494330At01P129G04P129H101F1_094.ab1   779 
  784  C BE494330At01P129G04P129H101R1_094.ab1   159 
  788    BE494330At01P129G04P129H101F1_094.ab1   787 
  792  C BE494330At01P129G04P129H101R1_094.ab1   151 
  868    BE494330At01P129G04P129H101F1_094.ab1   867 
  872  C BE494330At01P129G04P129H101R1_094.ab1    71 
Contig length: old 941, new 942

Contig length: old 942, new 942
New start: 0