No. words: 1705; after pruning: 1665


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:890)  767  1.60 0.00 0.00  BE494330At02P129G04P129H101F1_092.ab1       49   862 (0)  C BE494330At02P129G04P129H101R1_092.ab1   (0)   843    30 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  372 nodes

 188 str. conn. components

Path
    1    BE494330At02P129G04P129H101F1_092.ab1     1 
   60  C BE494330At02P129G04P129H101R1_092.ab1   832 
   72    BE494330At02P129G04P129H101F1_092.ab1    72 
   80  C BE494330At02P129G04P129H101R1_092.ab1   812 
  100    BE494330At02P129G04P129H101F1_092.ab1   100 
  112  C BE494330At02P129G04P129H101R1_092.ab1   780 
  170    BE494330At02P129G04P129H101F1_092.ab1   170 
  174  C BE494330At02P129G04P129H101R1_092.ab1   718 
  245    BE494330At02P129G04P129H101F1_092.ab1   245 
  509  C BE494330At02P129G04P129H101R1_092.ab1   383 
  683    BE494330At02P129G04P129H101F1_092.ab1   683 
  699  C BE494330At02P129G04P129H101R1_092.ab1   193 
  703    BE494330At02P129G04P129H101F1_092.ab1   703 
  735  C BE494330At02P129G04P129H101R1_092.ab1   157 
  739    BE494330At02P129G04P129H101F1_092.ab1   739 
  809  C BE494330At02P129G04P129H101R1_092.ab1    83 
  813    BE494330At02P129G04P129H101F1_092.ab1   813 
  817  C BE494330At02P129G04P129H101R1_092.ab1    75 
  829    BE494330At02P129G04P129H101F1_092.ab1   829 
  839  C BE494330At02P129G04P129H101R1_092.ab1    53 
  843    BE494330At02P129G04P129H101F1_092.ab1   843 
  847  C BE494330At02P129G04P129H101R1_092.ab1    45 
  851    BE494330At02P129G04P129H101F1_092.ab1   851 
  859  C BE494330At02P129G04P129H101R1_092.ab1    33 
Contig length: old 891, new 891

Contig length: old 891, new 891
New start: 0 
S Change at: 679; seg lengths: entry 1, contig 1