No. words: 1809; after pruning: 1769


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.0 (1,1:942)  849  0.35 0.00 0.00  BE494330Tu01P129G04P129H101F1_087.ab1       22   887 (0)  C BE494330Tu01P129G04P129H101R1_087.ab1   (0)   922    57 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  426 nodes

 215 str. conn. components

Path
    1    BE494330Tu01P129G04P129H101F1_087.ab1     1 
   25  C BE494330Tu01P129G04P129H101R1_087.ab1   919 
   37    BE494330Tu01P129G04P129H101F1_087.ab1    37 
   69  C BE494330Tu01P129G04P129H101R1_087.ab1   875 
   82    BE494330Tu01P129G04P129H101F1_087.ab1    82 
  524  C BE494330Tu01P129G04P129H101R1_087.ab1   420 
Contig length: old 943, new 943

Contig length: old 943, new 943
New start: 0