No. words: 1131; after pruning: 1105


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 3.7 (1,1:847)  253  1.79 0.00 0.00  BE494474Sn25P116E04P078F081F1_066.ab1        1   279 (1)  C BE494474Sn25P116E04P078F081R1_066.ab1   (3)   848   570 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  130 nodes

 67 str. conn. components

Path
    1  C BE494474Sn25P116E04P078F081R1_066.ab1   851 
   19    BE494474Sn25P116E04P078F081F1_066.ab1    16 
  195  C BE494474Sn25P116E04P078F081R1_066.ab1   657 
  203    BE494474Sn25P116E04P078F081F1_066.ab1   200 
  219  C BE494474Sn25P116E04P078F081R1_066.ab1   633 
  223    BE494474Sn25P116E04P078F081F1_066.ab1   220 
  227  C BE494474Sn25P116E04P078F081R1_066.ab1   625 
Contig length: old 851, new 851

Contig length: old 851, new 851
New start: 0