No. words: 1646; after pruning: 1620


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.2 (1,1:826)  725  0.40 0.00 0.00  BE494474Sn28P116B04P078F081F1_086.ab1        1   749 (0)  C BE494474Sn28P116B04P078F081R1_086.ab1   (70)   827    79 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  368 nodes

 186 str. conn. components

Path
    1  C BE494474Sn28P116B04P078F081R1_086.ab1   897 
   74    BE494474Sn28P116B04P078F081F1_086.ab1     4 
  199  C BE494474Sn28P116B04P078F081R1_086.ab1   699 
  203    BE494474Sn28P116B04P078F081F1_086.ab1   133 
  223  C BE494474Sn28P116B04P078F081R1_086.ab1   675 
  227    BE494474Sn28P116B04P078F081F1_086.ab1   157 
  231  C BE494474Sn28P116B04P078F081R1_086.ab1   667 
  235    BE494474Sn28P116B04P078F081F1_086.ab1   165 
  243  C BE494474Sn28P116B04P078F081R1_086.ab1   655 
  263    BE494474Sn28P116B04P078F081F1_086.ab1   193 
  267  C BE494474Sn28P116B04P078F081R1_086.ab1   631 
  271    BE494474Sn28P116B04P078F081F1_086.ab1   201 
  275  C BE494474Sn28P116B04P078F081R1_086.ab1   623 
  379    BE494474Sn28P116B04P078F081F1_086.ab1   309 
  387  C BE494474Sn28P116B04P078F081R1_086.ab1   511 
Contig length: old 897, new 897

Contig length: old 897, new 897
New start: 0