No. words: 1583; after pruning: 1557


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.4 (1,1:834)  686  0.14 0.00 0.00  BE494474Sn31P116E04P078F081F1_092.ab1        1   706 (0)  C BE494474Sn31P116E04P078F081R1_092.ab1   (42)   835   130 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  352 nodes

 178 str. conn. components

Path
    1  C BE494474Sn31P116E04P078F081R1_092.ab1   877 
   50    BE494474Sn31P116E04P078F081F1_092.ab1     8 
  442  C BE494474Sn31P116E04P078F081R1_092.ab1   436 
Contig length: old 877, new 877

Contig length: old 877, new 877
New start: 0