No. words: 1568; after pruning: 1514


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.8 (1,1:848)  657  0.58 0.15 0.00  BE494474Ta11P116E04P078F081F1_080.ab1        1   686 (0)  C BE494474Ta11P116E04P078F081R1_080.ab1   (32)   850   164 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  330 nodes

 167 str. conn. components

Path
    1  C BE494474Ta11P116E04P078F081R1_080.ab1   882 
   46    BE494474Ta11P116E04P078F081F1_080.ab1    13 
  331  C BE494474Ta11P116E04P078F081R1_080.ab1   552 
  395    BE494474Ta11P116E04P078F081F1_080.ab1   362 
  399  C BE494474Ta11P116E04P078F081R1_080.ab1   484 
  415    BE494474Ta11P116E04P078F081F1_080.ab1   382 
  419  C BE494474Ta11P116E04P078F081R1_080.ab1   464 
  506    BE494474Ta11P116E04P078F081F1_080.ab1   473 
  510  C BE494474Ta11P116E04P078F081R1_080.ab1   373 
Contig length: old 882, new 882

Contig length: old 882, new 882
New start: 0