No. words: 1354; after pruning: 1328


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:848)  489  0.40 0.00 0.00  BE494474Ta14P116E04P078F081F1_093.ab1      181   685 (0)  C BE494474Ta14P116E04P078F081R1_093.ab1   (0)   669   165 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1    BE494474Ta14P116E04P078F081F1_093.ab1     1 
  312  C BE494474Ta14P116E04P078F081R1_093.ab1   538 
  348    BE494474Ta14P116E04P078F081F1_093.ab1   348 
  408  C BE494474Ta14P116E04P078F081R1_093.ab1   442 
  460    BE494474Ta14P116E04P078F081F1_093.ab1   460 
  476  C BE494474Ta14P116E04P078F081R1_093.ab1   374 
Contig length: old 849, new 849

Contig length: old 849, new 849
New start: 0