No. words: 1818; after pruning: 1792


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.1 (1,1:881)  861  0.00 0.00 0.11  BE494474Ta16P116B04P078F081F1_066.ab1        1   882 (15)  C BE494474Ta16P116B04P078F081R1_066.ab1   (40)   881     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  440 nodes

 222 str. conn. components

Path
    1  C BE494474Ta16P116B04P078F081R1_066.ab1   921 
   44    BE494474Ta16P116B04P078F081F1_066.ab1     4 
   72  C BE494474Ta16P116B04P078F081R1_066.ab1   850 
   80    BE494474Ta16P116B04P078F081F1_066.ab1    40 
  424  C BE494474Ta16P116B04P078F081R1_066.ab1   498 
  918    BE494474Ta16P116B04P078F081F1_066.ab1   879 
Contig length: old 936, new 936

Contig length: old 936, new 937
New start: 0 
I Change at: 914; seg lengths: entry 1, contig 0