No. words: 1493; after pruning: 1453


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.7 (1,1:854)  439  7.21 0.00 1.28  BE494474Ta17P116E04P078F081F1_074.ab1        1   624 (0)  C BE494474Ta17P116E04P078F081R1_074.ab1   (18)   851   236 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BE494474Ta17P116E04P078F081R1_074.ab1   869 
   22    BE494474Ta17P116E04P078F081F1_074.ab1     4 
   34  C BE494474Ta17P116E04P078F081R1_074.ab1   836 
   38    BE494474Ta17P116E04P078F081F1_074.ab1    20 
   94  C BE494474Ta17P116E04P078F081R1_074.ab1   776 
   98    BE494474Ta17P116E04P078F081F1_074.ab1    80 
  210  C BE494474Ta17P116E04P078F081R1_074.ab1   660 
  214    BE494474Ta17P116E04P078F081F1_074.ab1   196 
  226  C BE494474Ta17P116E04P078F081R1_074.ab1   644 
  242    BE494474Ta17P116E04P078F081F1_074.ab1   224 
  246  C BE494474Ta17P116E04P078F081R1_074.ab1   624 
Contig length: old 869, new 869

Contig length: old 869, new 869
New start: 0