No. words: 1349; after pruning: 1309


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -2.6 -2.6 (1,1:851)  292  9.40 0.80 1.80  BE494474Ta18P116E04P078F081F1_089.ab1      168   667 (0)  C BE494474Ta18P116E04P078F081R1_089.ab1   (0)   682   188 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-2.6       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  170 nodes

 87 str. conn. components

Path
    1    BE494474Ta18P116E04P078F081F1_089.ab1     1 
  207  C BE494474Ta18P116E04P078F081R1_089.ab1   643 
  211    BE494474Ta18P116E04P078F081F1_089.ab1   211 
  215  C BE494474Ta18P116E04P078F081R1_089.ab1   635 
Contig length: old 852, new 849

Contig length: old 849, new 849
New start: 0