No. words: 1797; after pruning: 1771


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 18.1 (1,1:871)  852  0.00 0.00 0.00  BE494474Ta23P116B04P078F081F1_089.ab1        1   869 (52)  C BE494474Ta23P116B04P078F081R1_089.ab1   (4)   872     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  436 nodes

 220 str. conn. components

Path
    1  C BE494474Ta23P116B04P078F081R1_089.ab1   876 
    8    BE494474Ta23P116B04P078F081F1_089.ab1     4 
   36  C BE494474Ta23P116B04P078F081R1_089.ab1   841 
   40    BE494474Ta23P116B04P078F081F1_089.ab1    36 
  392  C BE494474Ta23P116B04P078F081R1_089.ab1   485 
  868    BE494474Ta23P116B04P078F081F1_089.ab1   864 
Contig length: old 925, new 925

Contig length: old 925, new 925
New start: 0