No. words: 1479; after pruning: 1453


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.8 (1,1:849)  608  0.00 0.00 0.16  BE494474Ta23P116E04P078F081F1_068.ab1        2   630 (0)  C BE494474Ta23P116E04P078F081R1_068.ab1   (0)   849   222 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1    BE494474Ta23P116E04P078F081F1_068.ab1     1 
    5  C BE494474Ta23P116E04P078F081R1_068.ab1   846 
    9    BE494474Ta23P116E04P078F081F1_068.ab1     9 
  253  C BE494474Ta23P116E04P078F081R1_068.ab1   598 
  257    BE494474Ta23P116E04P078F081F1_068.ab1   257 
  265  C BE494474Ta23P116E04P078F081R1_068.ab1   586 
  269    BE494474Ta23P116E04P078F081F1_068.ab1   269 
  273  C BE494474Ta23P116E04P078F081R1_068.ab1   578 
  277    BE494474Ta23P116E04P078F081F1_068.ab1   277 
  281  C BE494474Ta23P116E04P078F081R1_068.ab1   570 
  289    BE494474Ta23P116E04P078F081F1_068.ab1   289 
  293  C BE494474Ta23P116E04P078F081R1_068.ab1   558 
Contig length: old 850, new 850

Contig length: old 850, new 850
New start: 0