No. words: 1740; after pruning: 1714


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.2 (1,1:888)  804  0.00 0.00 0.00  BE494474Td03P116B04P078F081F1_077.ab1        1   818 (0)  C BE494474Td03P116B04P078F081R1_077.ab1   (33)   889    72 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  410 nodes

 207 str. conn. components

Path
    1  C BE494474Td03P116B04P078F081R1_077.ab1   922 
   37    BE494474Td03P116B04P078F081F1_077.ab1     4 
  369  C BE494474Td03P116B04P078F081R1_077.ab1   554 
  377    BE494474Td03P116B04P078F081F1_077.ab1   344 
  429  C BE494474Td03P116B04P078F081R1_077.ab1   494 
  449    BE494474Td03P116B04P078F081F1_077.ab1   416 
  517  C BE494474Td03P116B04P078F081R1_077.ab1   406 
Contig length: old 922, new 922

Contig length: old 922, new 922
New start: 0