No. words: 1244; after pruning: 1218


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.0 (1,1:972)  253  1.48 0.00 0.00  BE494474Tu01P078F02P078F081F1_022.ab1      308   578 (0)  C BE494474Tu01P078F02P078F081R1_022.ab1   (0)   666   396 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  134 nodes

 69 str. conn. components

Path
    1    BE494474Tu01P078F02P078F081F1_022.ab1     1 
  407  C BE494474Tu01P078F02P078F081R1_022.ab1   567 
  431    BE494474Tu01P078F02P078F081F1_022.ab1   431 
  439  C BE494474Tu01P078F02P078F081R1_022.ab1   535 
Contig length: old 973, new 973

Contig length: old 973, new 973
New start: 0