No. words: 1187; after pruning: 1147


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.9 (1,1:962)  222  0.45 0.00 0.00  BE494807At01P078G02P078G081F1_033.ab1      418   641 (0)  C BE494807At01P078G02P078G081R1_033.ab1   (0)   546   323 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  110 nodes

 57 str. conn. components

Path
    1    BE494807At01P078G02P078G081F1_033.ab1     1 
  433  C BE494807At01P078G02P078G081R1_033.ab1   531 
  437    BE494807At01P078G02P078G081F1_033.ab1   437 
  457  C BE494807At01P078G02P078G081R1_033.ab1   507 
  461    BE494807At01P078G02P078G081F1_033.ab1   461 
  477  C BE494807At01P078G02P078G081R1_033.ab1   487 
  481    BE494807At01P078G02P078G081F1_033.ab1   481 
  485  C BE494807At01P078G02P078G081R1_033.ab1   479 
  497    BE494807At01P078G02P078G081F1_033.ab1   497 
  511  C BE494807At01P078G02P078G081R1_033.ab1   453 
Contig length: old 963, new 963

Contig length: old 963, new 963
New start: 0