No. words: 1553; after pruning: 1527


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.0 (1,1:956)  580  0.34 0.00 0.00  BE494807Ld06P078G02P078G081F1_074.ab1      110   705 (0)  C BE494807Ld06P078G02P078G081R1_074.ab1   (0)   848   253 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1    BE494807Ld06P078G02P078G081F1_074.ab1     1 
  317  C BE494807Ld06P078G02P078G081R1_074.ab1   641 
  321    BE494807Ld06P078G02P078G081F1_074.ab1   321 
  333  C BE494807Ld06P078G02P078G081R1_074.ab1   625 
Contig length: old 957, new 957

Contig length: old 957, new 957
New start: 0