No. words: 1749; after pruning: 1709


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.9 (1,1:873)  845  0.23 0.00 0.00  BE494807Sn24P137B04P078G081F1_058.ab1       16   874 (16)  C BE494807Sn24P137B04P078G081R1_058.ab1   (0)   859     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  426 nodes

 215 str. conn. components

Path
    1    BE494807Sn24P137B04P078G081F1_058.ab1     1 
  395  C BE494807Sn24P137B04P078G081R1_058.ab1   480 
  431    BE494807Sn24P137B04P078G081F1_058.ab1   431 
  439  C BE494807Sn24P137B04P078G081R1_058.ab1   436 
  447    BE494807Sn24P137B04P078G081F1_058.ab1   447 
  451  C BE494807Sn24P137B04P078G081R1_058.ab1   424 
  471    BE494807Sn24P137B04P078G081F1_058.ab1   471 
  479  C BE494807Sn24P137B04P078G081R1_058.ab1   396 
  527    BE494807Sn24P137B04P078G081F1_058.ab1   527 
  531  C BE494807Sn24P137B04P078G081R1_058.ab1   344 
  871    BE494807Sn24P137B04P078G081F1_058.ab1   871 
Contig length: old 890, new 890

Contig length: old 890, new 890
New start: 0