No. words: 1803; after pruning: 1777


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.9 (1,1:873)  854  0.00 0.11 0.11  BE494807Sn25P137B04P078G081F1_055.ab1        1   874 (22)  C BE494807Sn25P137B04P078G081R1_055.ab1   (33)   874     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  424 nodes

 214 str. conn. components

Path
    1  C BE494807Sn25P137B04P078G081R1_055.ab1   907 
   47    BE494807Sn25P137B04P078G081F1_055.ab1    13 
  326  C BE494807Sn25P137B04P078G081R1_055.ab1   583 
  330    BE494807Sn25P137B04P078G081F1_055.ab1   296 
  390  C BE494807Sn25P137B04P078G081R1_055.ab1   519 
  398    BE494807Sn25P137B04P078G081F1_055.ab1   364 
  406  C BE494807Sn25P137B04P078G081R1_055.ab1   503 
  422    BE494807Sn25P137B04P078G081F1_055.ab1   388 
  430  C BE494807Sn25P137B04P078G081R1_055.ab1   479 
  902    BE494807Sn25P137B04P078G081F1_055.ab1   868 
Contig length: old 929, new 930

Contig length: old 930, new 930
New start: 0