No. words: 1707; after pruning: 1681


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.5 (1,1:864)  823  0.00 0.00 0.00  BE494807Sn26P137B04P078G081F1_056.ab1       34   865 (10)  C BE494807Sn26P137B04P078G081R1_056.ab1   (0)   832     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  418 nodes

 211 str. conn. components

Path
    1    BE494807Sn26P137B04P078G081F1_056.ab1     1 
  285  C BE494807Sn26P137B04P078G081R1_056.ab1   581 
  289    BE494807Sn26P137B04P078G081F1_056.ab1   289 
  337  C BE494807Sn26P137B04P078G081R1_056.ab1   529 
  341    BE494807Sn26P137B04P078G081F1_056.ab1   341 
  349  C BE494807Sn26P137B04P078G081R1_056.ab1   517 
  353    BE494807Sn26P137B04P078G081F1_056.ab1   353 
  365  C BE494807Sn26P137B04P078G081R1_056.ab1   501 
  381    BE494807Sn26P137B04P078G081F1_056.ab1   381 
  385  C BE494807Sn26P137B04P078G081R1_056.ab1   481 
  437    BE494807Sn26P137B04P078G081F1_056.ab1   437 
  441  C BE494807Sn26P137B04P078G081R1_056.ab1   425 
  465    BE494807Sn26P137B04P078G081F1_056.ab1   465 
  473  C BE494807Sn26P137B04P078G081R1_056.ab1   393 
  861    BE494807Sn26P137B04P078G081F1_056.ab1   861 
Contig length: old 875, new 875

Contig length: old 875, new 875
New start: 0