No. words: 1703; after pruning: 1677


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 17.6 (1,1:882)  802  0.12 0.00 0.00  BE494807Sn27P137B04P078G081F1_053.ab1       19   834 (0)  C BE494807Sn27P137B04P078G081R1_053.ab1   (4)   865    50 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  408 nodes

 206 str. conn. components

Path
    1    BE494807Sn27P137B04P078G081F1_053.ab1     1 
  307  C BE494807Sn27P137B04P078G081R1_053.ab1   577 
  311    BE494807Sn27P137B04P078G081F1_053.ab1   311 
  355  C BE494807Sn27P137B04P078G081R1_053.ab1   529 
  359    BE494807Sn27P137B04P078G081F1_053.ab1   359 
  391  C BE494807Sn27P137B04P078G081R1_053.ab1   493 
  399    BE494807Sn27P137B04P078G081F1_053.ab1   399 
  403  C BE494807Sn27P137B04P078G081R1_053.ab1   481 
  439    BE494807Sn27P137B04P078G081F1_053.ab1   439 
  447  C BE494807Sn27P137B04P078G081R1_053.ab1   437 
Contig length: old 883, new 883

Contig length: old 883, new 883
New start: 0