No. words: 1708; after pruning: 1682


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.3 (1,1:871)  818  0.12 0.00 0.00  BE494807Sn31P137B04P078G081F1_049.ab1       43   872 (6)  C BE494807Sn31P137B04P078G081R1_049.ab1   (0)   830     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  414 nodes

 209 str. conn. components

Path
    1    BE494807Sn31P137B04P078G081F1_049.ab1     1 
  357  C BE494807Sn31P137B04P078G081R1_049.ab1   516 
  361    BE494807Sn31P137B04P078G081F1_049.ab1   361 
  373  C BE494807Sn31P137B04P078G081R1_049.ab1   500 
  377    BE494807Sn31P137B04P078G081F1_049.ab1   377 
  381  C BE494807Sn31P137B04P078G081R1_049.ab1   492 
  389    BE494807Sn31P137B04P078G081F1_049.ab1   389 
  393  C BE494807Sn31P137B04P078G081R1_049.ab1   480 
  429    BE494807Sn31P137B04P078G081F1_049.ab1   429 
  437  C BE494807Sn31P137B04P078G081R1_049.ab1   436 
  869    BE494807Sn31P137B04P078G081F1_049.ab1   869 
Contig length: old 878, new 878

Contig length: old 878, new 878
New start: 0