No. words: 1761; after pruning: 1735


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.6 (1,1:877)  846  0.00 0.23 0.11  BE494807Ta11P137B04P078G081F1_037.ab1       10   879 (11)  C BE494807Ta11P137B04P078G081R1_037.ab1   (0)   871     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  418 nodes

 211 str. conn. components

Path
    1    BE494807Ta11P137B04P078G081F1_037.ab1     1 
  305  C BE494807Ta11P137B04P078G081R1_037.ab1   575 
  309    BE494807Ta11P137B04P078G081F1_037.ab1   309 
  377  C BE494807Ta11P137B04P078G081R1_037.ab1   503 
  393    BE494807Ta11P137B04P078G081F1_037.ab1   393 
  401  C BE494807Ta11P137B04P078G081R1_037.ab1   479 
  437    BE494807Ta11P137B04P078G081F1_037.ab1   437 
  441  C BE494807Ta11P137B04P078G081R1_037.ab1   439 
  873    BE494807Ta11P137B04P078G081F1_037.ab1   873 
Contig length: old 890, new 890

Contig length: old 890, new 892
New start: 0 
I Change at: 16; seg lengths: entry 1, contig 0
I Change at: 24; seg lengths: entry 1, contig 0