No. words: 1660; after pruning: 1634


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.1 (1,1:873)  772  0.00 0.00 0.13  BE494807Ta12P137B04P078G081F1_038.ab1       44   830 (0)  C BE494807Ta12P137B04P078G081R1_038.ab1   (0)   830    45 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  382 nodes

 193 str. conn. components

Path
    1    BE494807Ta12P137B04P078G081F1_038.ab1     1 
  292  C BE494807Ta12P137B04P078G081R1_038.ab1   583 
  296    BE494807Ta12P137B04P078G081F1_038.ab1   296 
  344  C BE494807Ta12P137B04P078G081R1_038.ab1   531 
  352    BE494807Ta12P137B04P078G081F1_038.ab1   352 
  360  C BE494807Ta12P137B04P078G081R1_038.ab1   515 
  364    BE494807Ta12P137B04P078G081F1_038.ab1   364 
  372  C BE494807Ta12P137B04P078G081R1_038.ab1   503 
  376    BE494807Ta12P137B04P078G081F1_038.ab1   376 
  384  C BE494807Ta12P137B04P078G081R1_038.ab1   491 
  388    BE494807Ta12P137B04P078G081F1_038.ab1   388 
  396  C BE494807Ta12P137B04P078G081R1_038.ab1   479 
Contig length: old 874, new 874

Contig length: old 874, new 874
New start: 0