No. words: 1767; after pruning: 1741


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.1 (1,1:882)  852  0.11 0.11 0.00  BE494807Ta13P137B04P078G081F1_035.ab1       14   883 (13)  C BE494807Ta13P137B04P078G081R1_035.ab1   (0)   871     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  432 nodes

 218 str. conn. components

Path
    1    BE494807Ta13P137B04P078G081F1_035.ab1     1 
  303  C BE494807Ta13P137B04P078G081R1_035.ab1   581 
  311    BE494807Ta13P137B04P078G081F1_035.ab1   311 
  331  C BE494807Ta13P137B04P078G081R1_035.ab1   553 
  339    BE494807Ta13P137B04P078G081F1_035.ab1   339 
  355  C BE494807Ta13P137B04P078G081R1_035.ab1   529 
  359    BE494807Ta13P137B04P078G081F1_035.ab1   359 
  367  C BE494807Ta13P137B04P078G081R1_035.ab1   517 
  371    BE494807Ta13P137B04P078G081F1_035.ab1   371 
  383  C BE494807Ta13P137B04P078G081R1_035.ab1   501 
  387    BE494807Ta13P137B04P078G081F1_035.ab1   387 
  391  C BE494807Ta13P137B04P078G081R1_035.ab1   493 
  399    BE494807Ta13P137B04P078G081F1_035.ab1   399 
  403  C BE494807Ta13P137B04P078G081R1_035.ab1   481 
  439    BE494807Ta13P137B04P078G081F1_035.ab1   439 
  443  C BE494807Ta13P137B04P078G081R1_035.ab1   441 
  879    BE494807Ta13P137B04P078G081F1_035.ab1   879 
Contig length: old 896, new 896

Contig length: old 896, new 897
New start: 0 
I Change at: 27; seg lengths: entry 1, contig 0