No. words: 1749; after pruning: 1723


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.2 (1,1:873)  851  0.12 0.00 0.12  BE494807Ta14P137B04P078G081F1_036.ab1        7   875 (6)  C BE494807Ta14P137B04P078G081R1_036.ab1   (0)   868     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  424 nodes

 214 str. conn. components

Path
    1    BE494807Ta14P137B04P078G081F1_036.ab1     1 
  357  C BE494807Ta14P137B04P078G081R1_036.ab1   519 
  365    BE494807Ta14P137B04P078G081F1_036.ab1   365 
  373  C BE494807Ta14P137B04P078G081R1_036.ab1   503 
  477    BE494807Ta14P137B04P078G081F1_036.ab1   477 
  481  C BE494807Ta14P137B04P078G081R1_036.ab1   395 
  869    BE494807Ta14P137B04P078G081F1_036.ab1   869 
Contig length: old 881, new 881

Contig length: old 881, new 881
New start: 0