No. words: 1570; after pruning: 1502


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.4 (1,1:873)  684  0.43 0.00 0.00  BE494807Ta18P137B04P078G081F1_064.ab1      147   842 (0)  C BE494807Ta18P137B04P078G081R1_064.ab1   (0)   728    33 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  340 nodes

 172 str. conn. components

Path
    1    BE494807Ta18P137B04P078G081F1_064.ab1     1 
  395  C BE494807Ta18P137B04P078G081R1_064.ab1   480 
  407    BE494807Ta18P137B04P078G081F1_064.ab1   407 
  454  C BE494807Ta18P137B04P078G081R1_064.ab1   421 
  458    BE494807Ta18P137B04P078G081F1_064.ab1   458 
  466  C BE494807Ta18P137B04P078G081R1_064.ab1   409 
  474    BE494807Ta18P137B04P078G081F1_064.ab1   474 
  482  C BE494807Ta18P137B04P078G081R1_064.ab1   393 
  510    BE494807Ta18P137B04P078G081F1_064.ab1   510 
  514  C BE494807Ta18P137B04P078G081R1_064.ab1   361 
  518    BE494807Ta18P137B04P078G081F1_064.ab1   518 
  522  C BE494807Ta18P137B04P078G081R1_064.ab1   353 
  530    BE494807Ta18P137B04P078G081F1_064.ab1   530 
  534  C BE494807Ta18P137B04P078G081R1_064.ab1   341 
Contig length: old 874, new 874

Contig length: old 874, new 874
New start: 0