No. words: 1745; after pruning: 1719


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.0 (1,1:862)  849  0.00 0.12 0.00  BE494807Ta21P137B04P078G081F1_059.ab1        1   863 (12)  C BE494807Ta21P137B04P078G081R1_059.ab1   (6)   864     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  430 nodes

 217 str. conn. components

Path
    1  C BE494807Ta21P137B04P078G081R1_059.ab1   870 
   18    BE494807Ta21P137B04P078G081F1_059.ab1    11 
  286  C BE494807Ta21P137B04P078G081R1_059.ab1   585 
  294    BE494807Ta21P137B04P078G081F1_059.ab1   287 
  354  C BE494807Ta21P137B04P078G081R1_059.ab1   517 
  358    BE494807Ta21P137B04P078G081F1_059.ab1   351 
  382  C BE494807Ta21P137B04P078G081R1_059.ab1   489 
  386    BE494807Ta21P137B04P078G081F1_059.ab1   379 
  394  C BE494807Ta21P137B04P078G081R1_059.ab1   477 
  426    BE494807Ta21P137B04P078G081F1_059.ab1   419 
  442  C BE494807Ta21P137B04P078G081R1_059.ab1   429 
  542    BE494807Ta21P137B04P078G081F1_059.ab1   535 
  546  C BE494807Ta21P137B04P078G081R1_059.ab1   325 
  710    BE494807Ta21P137B04P078G081F1_059.ab1   703 
  714  C BE494807Ta21P137B04P078G081R1_059.ab1   157 
  806    BE494807Ta21P137B04P078G081F1_059.ab1   799 
  810  C BE494807Ta21P137B04P078G081R1_059.ab1    61 
  866    BE494807Ta21P137B04P078G081F1_059.ab1   859 
Contig length: old 882, new 882

Contig length: old 882, new 882
New start: 0