No. words: 1624; after pruning: 1598


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.1 (1,1:873)  734  0.27 0.00 0.00  BE494807Ta23P137B04P078G081F1_057.ab1       44   793 (0)  C BE494807Ta23P137B04P078G081R1_057.ab1   (0)   831    82 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  364 nodes

 184 str. conn. components

Path
    1    BE494807Ta23P137B04P078G081F1_057.ab1     1 
  344  C BE494807Ta23P137B04P078G081R1_057.ab1   531 
  348    BE494807Ta23P137B04P078G081F1_057.ab1   348 
  380  C BE494807Ta23P137B04P078G081R1_057.ab1   495 
  384    BE494807Ta23P137B04P078G081F1_057.ab1   384 
  396  C BE494807Ta23P137B04P078G081R1_057.ab1   479 
  412    BE494807Ta23P137B04P078G081F1_057.ab1   412 
  424  C BE494807Ta23P137B04P078G081R1_057.ab1   451 
  432    BE494807Ta23P137B04P078G081F1_057.ab1   432 
  444  C BE494807Ta23P137B04P078G081R1_057.ab1   431 
  508    BE494807Ta23P137B04P078G081F1_057.ab1   508 
  512  C BE494807Ta23P137B04P078G081R1_057.ab1   363 
Contig length: old 874, new 874

Contig length: old 874, new 874
New start: 0