No. words: 1663; after pruning: 1637


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.8 (1,1:871)  777  0.00 0.00 0.13  BE494807Td02P137B04P078G081F1_048.ab1       51   842 (0)  C BE494807Td02P137B04P078G081R1_048.ab1   (0)   821    31 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  388 nodes

 196 str. conn. components

Path
    1    BE494807Td02P137B04P078G081F1_048.ab1     1 
  290  C BE494807Td02P137B04P078G081R1_048.ab1   583 
  294    BE494807Td02P137B04P078G081F1_048.ab1   294 
  326  C BE494807Td02P137B04P078G081R1_048.ab1   547 
  330    BE494807Td02P137B04P078G081F1_048.ab1   330 
  358  C BE494807Td02P137B04P078G081R1_048.ab1   515 
  362    BE494807Td02P137B04P078G081F1_048.ab1   362 
  394  C BE494807Td02P137B04P078G081R1_048.ab1   479 
  422    BE494807Td02P137B04P078G081F1_048.ab1   422 
  438  C BE494807Td02P137B04P078G081R1_048.ab1   435 
  506    BE494807Td02P137B04P078G081F1_048.ab1   506 
  510  C BE494807Td02P137B04P078G081R1_048.ab1   363 
  558    BE494807Td02P137B04P078G081F1_048.ab1   558 
  562  C BE494807Td02P137B04P078G081R1_048.ab1   311 
Contig length: old 872, new 872

Contig length: old 872, new 872
New start: 0