No. words: 261; after pruning: 235


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    2   -0.5 -0.5 (1,1:84)   68  0.00 1.20 2.41  BE494888Ta24P052G05P059B121F1_017.ab1        3    85 (40)  C BE494888Ta24P052G05P059B121R1_017.ab1   (54)    82     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.5       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  36 nodes

 20 str. conn. components

Path
    1  C BE494888Ta24P052G05P059B121R1_017.ab1   136 
   78    BE494888Ta24P052G05P059B121F1_017.ab1    25 
   86  C BE494888Ta24P052G05P059B121R1_017.ab1    51 
   98    BE494888Ta24P052G05P059B121F1_017.ab1    45 
  114  C BE494888Ta24P052G05P059B121R1_017.ab1    23 
  118    BE494888Ta24P052G05P059B121F1_017.ab1    65 
Contig length: old 176, new 178

Contig length: old 178, new 178
New start: 0