No. words: 255; after pruning: 229


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    4   -0.1 -0.1 (1,1:76)   65  0.00 1.39 0.00  BE494888Td10P052G05P059B121F1_014.ab1        6    77 (56)  C BE494888Td10P052G05P059B121R1_014.ab1   (49)    73     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.1       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  36 nodes

 20 str. conn. components

Path
    1  C BE494888Td10P052G05P059B121R1_014.ab1   122 
   78    BE494888Td10P052G05P059B121F1_014.ab1    33 
   82  C BE494888Td10P052G05P059B121R1_014.ab1    41 
   98    BE494888Td10P052G05P059B121F1_014.ab1    53 
  110  C BE494888Td10P052G05P059B121R1_014.ab1    13 
  118    BE494888Td10P052G05P059B121F1_014.ab1    73 
Contig length: old 178, new 178

Contig length: old 178, new 178
New start: 0