No. words: 1800; after pruning: 1774


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 19.1 (1,1:864)  840  0.00 0.00 0.12  BE495145As01P129A05P129B111F1_086.ab1        1   865 (39)  C BE495145As01P129A05P129B111R1_086.ab1   (32)   864     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  430 nodes

 217 str. conn. components

Path
    1  C BE495145As01P129A05P129B111R1_086.ab1   896 
   40    BE495145As01P129A05P129B111F1_086.ab1     8 
  332  C BE495145As01P129A05P129B111R1_086.ab1   565 
  372    BE495145As01P129A05P129B111F1_086.ab1   340 
  376  C BE495145As01P129A05P129B111R1_086.ab1   521 
  428    BE495145As01P129A05P129B111F1_086.ab1   396 
  444  C BE495145As01P129A05P129B111R1_086.ab1   453 
  460    BE495145As01P129A05P129B111F1_086.ab1   428 
  464  C BE495145As01P129A05P129B111R1_086.ab1   433 
  496    BE495145As01P129A05P129B111F1_086.ab1   464 
  504  C BE495145As01P129A05P129B111R1_086.ab1   393 
  876    BE495145As01P129A05P129B111F1_086.ab1   844 
Contig length: old 935, new 936

Contig length: old 936, new 936
New start: 0