No. words: 1770; after pruning: 1744


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.7 (1,1:837)  807  0.36 0.12 0.00  BE495145At02P129A05P129B111F1_007.ab1        1   838 (49)  C BE495145At02P129A05P129B111R1_007.ab1   (44)   839     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  410 nodes

 207 str. conn. components

Path
    1  C BE495145At02P129A05P129B111R1_007.ab1   883 
   55    BE495145At02P129A05P129B111F1_007.ab1    10 
  323  C BE495145At02P129A05P129B111R1_007.ab1   561 
  375    BE495145At02P129A05P129B111F1_007.ab1   330 
  391  C BE495145At02P129A05P129B111R1_007.ab1   493 
  395    BE495145At02P129A05P129B111F1_007.ab1   350 
  419  C BE495145At02P129A05P129B111R1_007.ab1   465 
  467    BE495145At02P129A05P129B111F1_007.ab1   422 
  475  C BE495145At02P129A05P129B111R1_007.ab1   409 
  487    BE495145At02P129A05P129B111F1_007.ab1   442 
  499  C BE495145At02P129A05P129B111R1_007.ab1   385 
  575    BE495145At02P129A05P129B111F1_007.ab1   530 
  579  C BE495145At02P129A05P129B111R1_007.ab1   305 
  583    BE495145At02P129A05P129B111F1_007.ab1   538 
  599  C BE495145At02P129A05P129B111R1_007.ab1   285 
  607    BE495145At02P129A05P129B111F1_007.ab1   562 
  611  C BE495145At02P129A05P129B111R1_007.ab1   273 
  615    BE495145At02P129A05P129B111F1_007.ab1   570 
  619  C BE495145At02P129A05P129B111R1_007.ab1   265 
  647    BE495145At02P129A05P129B111F1_007.ab1   602 
  659  C BE495145At02P129A05P129B111R1_007.ab1   225 
  807    BE495145At02P129A05P129B111F1_007.ab1   762 
  815  C BE495145At02P129A05P129B111R1_007.ab1    69 
  839    BE495145At02P129A05P129B111F1_007.ab1   794 
  869  C BE495145At02P129A05P129B111R1_007.ab1    15 
  877    BE495145At02P129A05P129B111F1_007.ab1   832 
Contig length: old 932, new 932

Contig length: old 932, new 932
New start: 0