No. words: 1481; after pruning: 1455 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 4 0.0 13.6 (1,1:762) 678 0.42 0.00 0.14 BE495145Ld02P129A05P129B111F1_052.ab1 19 732 (0) C BE495145Ld02P129A05P129B111R1_052.ab1 (4) 745 33 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 4 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 348 nodes 176 str. conn. components Path 1 BE495145Ld02P129A05P129B111F1_052.ab1 1 64 C BE495145Ld02P129A05P129B111R1_052.ab1 700 74 BE495145Ld02P129A05P129B111F1_052.ab1 75 454 C BE495145Ld02P129A05P129B111R1_052.ab1 310 490 BE495145Ld02P129A05P129B111F1_052.ab1 491 502 C BE495145Ld02P129A05P129B111R1_052.ab1 262 510 BE495145Ld02P129A05P129B111F1_052.ab1 511 518 C BE495145Ld02P129A05P129B111R1_052.ab1 246 546 BE495145Ld02P129A05P129B111F1_052.ab1 547 550 C BE495145Ld02P129A05P129B111R1_052.ab1 214 670 BE495145Ld02P129A05P129B111F1_052.ab1 671 686 C BE495145Ld02P129A05P129B111R1_052.ab1 78 714 BE495145Ld02P129A05P129B111F1_052.ab1 715 727 C BE495145Ld02P129A05P129B111R1_052.ab1 37 Contig length: old 763, new 763 Contig length: old 763, new 764 New start: 0 S Change at: 28; seg lengths: entry 1, contig 1 I Change at: 71; seg lengths: entry 1, contig 0