No. words: 1546; after pruning: 1520


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.2 (1,1:814)  709  0.00 0.00 0.00  BE495145Ld03P129A05P129B111F1_050.ab1       25   755 (0)  C BE495145Ld03P129A05P129B111R1_050.ab1   (0)   791    61 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  366 nodes

 185 str. conn. components

Path
    1    BE495145Ld03P129A05P129B111F1_050.ab1     1 
  412  C BE495145Ld03P129A05P129B111R1_050.ab1   404 
  436    BE495145Ld03P129A05P129B111F1_050.ab1   436 
  444  C BE495145Ld03P129A05P129B111R1_050.ab1   372 
  448    BE495145Ld03P129A05P129B111F1_050.ab1   448 
  464  C BE495145Ld03P129A05P129B111R1_050.ab1   352 
  488    BE495145Ld03P129A05P129B111F1_050.ab1   488 
  496  C BE495145Ld03P129A05P129B111R1_050.ab1   320 
  508    BE495145Ld03P129A05P129B111F1_050.ab1   508 
  516  C BE495145Ld03P129A05P129B111R1_050.ab1   300 
  524    BE495145Ld03P129A05P129B111F1_050.ab1   524 
  528  C BE495145Ld03P129A05P129B111R1_050.ab1   288 
Contig length: old 815, new 815

Contig length: old 815, new 815
New start: 0