No. words: 1628; after pruning: 1602


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.9 (1,1:864)  742  0.00 0.00 0.00  BE495145Ld04P129A05P129B111F1_079.ab1       60   822 (0)  C BE495145Ld04P129A05P129B111R1_079.ab1   (0)   806    44 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  384 nodes

 194 str. conn. components

Path
    1    BE495145Ld04P129A05P129B111F1_079.ab1     1 
   75  C BE495145Ld04P129A05P129B111R1_079.ab1   791 
   79    BE495145Ld04P129A05P129B111F1_079.ab1    79 
  419  C BE495145Ld04P129A05P129B111R1_079.ab1   447 
  427    BE495145Ld04P129A05P129B111F1_079.ab1   427 
  467  C BE495145Ld04P129A05P129B111R1_079.ab1   399 
  475    BE495145Ld04P129A05P129B111F1_079.ab1   475 
  483  C BE495145Ld04P129A05P129B111R1_079.ab1   383 
  491    BE495145Ld04P129A05P129B111F1_079.ab1   491 
  511  C BE495145Ld04P129A05P129B111R1_079.ab1   355 
  531    BE495145Ld04P129A05P129B111F1_079.ab1   531 
  559  C BE495145Ld04P129A05P129B111R1_079.ab1   307 
  567    BE495145Ld04P129A05P129B111F1_079.ab1   567 
  575  C BE495145Ld04P129A05P129B111R1_079.ab1   291 
  583    BE495145Ld04P129A05P129B111F1_079.ab1   583 
  587  C BE495145Ld04P129A05P129B111R1_079.ab1   279 
  743    BE495145Ld04P129A05P129B111F1_079.ab1   743 
  747  C BE495145Ld04P129A05P129B111R1_079.ab1   119 
  775    BE495145Ld04P129A05P129B111F1_079.ab1   775 
  791  C BE495145Ld04P129A05P129B111R1_079.ab1    75 
Contig length: old 865, new 865

Contig length: old 865, new 865
New start: 0