No. words: 1563; after pruning: 1537


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.0 (1,1:855)  677  0.14 0.14 0.00  BE495145Ld06P129A05P129B111F1_075.ab1       65   770 (0)  C BE495145Ld06P129A05P129B111R1_075.ab1   (0)   793    87 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  346 nodes

 175 str. conn. components

Path
    1    BE495145Ld06P129A05P129B111F1_075.ab1     1 
  116  C BE495145Ld06P129A05P129B111R1_075.ab1   742 
  124    BE495145Ld06P129A05P129B111F1_075.ab1   124 
  128  C BE495145Ld06P129A05P129B111R1_075.ab1   730 
  132    BE495145Ld06P129A05P129B111F1_075.ab1   132 
  160  C BE495145Ld06P129A05P129B111R1_075.ab1   698 
  164    BE495145Ld06P129A05P129B111F1_075.ab1   164 
  204  C BE495145Ld06P129A05P129B111R1_075.ab1   653 
  212    BE495145Ld06P129A05P129B111F1_075.ab1   212 
  228  C BE495145Ld06P129A05P129B111R1_075.ab1   629 
  240    BE495145Ld06P129A05P129B111F1_075.ab1   240 
  248  C BE495145Ld06P129A05P129B111R1_075.ab1   609 
  260    BE495145Ld06P129A05P129B111F1_075.ab1   260 
  264  C BE495145Ld06P129A05P129B111R1_075.ab1   593 
  280    BE495145Ld06P129A05P129B111F1_075.ab1   280 
  316  C BE495145Ld06P129A05P129B111R1_075.ab1   541 
  336    BE495145Ld06P129A05P129B111F1_075.ab1   336 
  340  C BE495145Ld06P129A05P129B111R1_075.ab1   517 
  344    BE495145Ld06P129A05P129B111F1_075.ab1   344 
  348  C BE495145Ld06P129A05P129B111R1_075.ab1   509 
  368    BE495145Ld06P129A05P129B111F1_075.ab1   368 
  376  C BE495145Ld06P129A05P129B111R1_075.ab1   481 
  400    BE495145Ld06P129A05P129B111F1_075.ab1   400 
  408  C BE495145Ld06P129A05P129B111R1_075.ab1   449 
  436    BE495145Ld06P129A05P129B111F1_075.ab1   436 
  444  C BE495145Ld06P129A05P129B111R1_075.ab1   413 
  580    BE495145Ld06P129A05P129B111F1_075.ab1   580 
  584  C BE495145Ld06P129A05P129B111R1_075.ab1   273 
  656    BE495145Ld06P129A05P129B111F1_075.ab1   656 
  660  C BE495145Ld06P129A05P129B111R1_075.ab1   197 
  720    BE495145Ld06P129A05P129B111F1_075.ab1   720 
  724  C BE495145Ld06P129A05P129B111R1_075.ab1   133 
  728    BE495145Ld06P129A05P129B111F1_075.ab1   728 
  732  C BE495145Ld06P129A05P129B111R1_075.ab1   125 
Contig length: old 856, new 856

Contig length: old 856, new 856
New start: 0