No. words: 1377; after pruning: 1337


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.9 (1,1:704)  661  0.15 0.00 0.00  BE495175As01P078A03P078A091F1_061.ab1       21   692 (0)  C BE495175As01P078A03P078A091R1_061.ab1   (0)   685    14 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  334 nodes

 169 str. conn. components

Path
    1    BE495175As01P078A03P078A091F1_061.ab1     1 
   88  C BE495175As01P078A03P078A091R1_061.ab1   618 
   92    BE495175As01P078A03P078A091F1_061.ab1    92 
  109  C BE495175As01P078A03P078A091R1_061.ab1   597 
  113    BE495175As01P078A03P078A091F1_061.ab1   113 
  129  C BE495175As01P078A03P078A091R1_061.ab1   577 
  133    BE495175As01P078A03P078A091F1_061.ab1   133 
  193  C BE495175As01P078A03P078A091R1_061.ab1   513 
  197    BE495175As01P078A03P078A091F1_061.ab1   197 
  257  C BE495175As01P078A03P078A091R1_061.ab1   449 
  269    BE495175As01P078A03P078A091F1_061.ab1   269 
  273  C BE495175As01P078A03P078A091R1_061.ab1   433 
  285    BE495175As01P078A03P078A091F1_061.ab1   285 
  293  C BE495175As01P078A03P078A091R1_061.ab1   413 
  305    BE495175As01P078A03P078A091F1_061.ab1   305 
  309  C BE495175As01P078A03P078A091R1_061.ab1   397 
  321    BE495175As01P078A03P078A091F1_061.ab1   321 
  325  C BE495175As01P078A03P078A091R1_061.ab1   381 
  341    BE495175As01P078A03P078A091F1_061.ab1   341 
  349  C BE495175As01P078A03P078A091R1_061.ab1   357 
  353    BE495175As01P078A03P078A091F1_061.ab1   353 
  357  C BE495175As01P078A03P078A091R1_061.ab1   349 
  365    BE495175As01P078A03P078A091F1_061.ab1   365 
  373  C BE495175As01P078A03P078A091R1_061.ab1   333 
  389    BE495175As01P078A03P078A091F1_061.ab1   389 
  393  C BE495175As01P078A03P078A091R1_061.ab1   313 
  413    BE495175As01P078A03P078A091F1_061.ab1   413 
  429  C BE495175As01P078A03P078A091R1_061.ab1   277 
  453    BE495175As01P078A03P078A091F1_061.ab1   453 
  461  C BE495175As01P078A03P078A091R1_061.ab1   245 
  493    BE495175As01P078A03P078A091F1_061.ab1   493 
  497  C BE495175As01P078A03P078A091R1_061.ab1   209 
  557    BE495175As01P078A03P078A091F1_061.ab1   557 
  561  C BE495175As01P078A03P078A091R1_061.ab1   145 
  565    BE495175As01P078A03P078A091F1_061.ab1   565 
  569  C BE495175As01P078A03P078A091R1_061.ab1   137 
Contig length: old 705, new 705

Contig length: old 705, new 705
New start: 0