No. words: 1342; after pruning: 1316


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.5 (1,1:673)  644  0.15 0.00 0.00  BE495175At01P078A03P078A091F1_057.ab1        1   657 (0)  C BE495175At01P078A03P078A091R1_057.ab1   (11)   674    18 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  328 nodes

 166 str. conn. components

Path
    1  C BE495175At01P078A03P078A091R1_057.ab1   685 
   15    BE495175At01P078A03P078A091F1_057.ab1     4 
  287  C BE495175At01P078A03P078A091R1_057.ab1   399 
  299    BE495175At01P078A03P078A091F1_057.ab1   288 
  307  C BE495175At01P078A03P078A091R1_057.ab1   379 
  323    BE495175At01P078A03P078A091F1_057.ab1   312 
  339  C BE495175At01P078A03P078A091R1_057.ab1   347 
  347    BE495175At01P078A03P078A091F1_057.ab1   336 
  351  C BE495175At01P078A03P078A091R1_057.ab1   335 
  367    BE495175At01P078A03P078A091F1_057.ab1   356 
  375  C BE495175At01P078A03P078A091R1_057.ab1   311 
  379    BE495175At01P078A03P078A091F1_057.ab1   368 
  383  C BE495175At01P078A03P078A091R1_057.ab1   303 
  395    BE495175At01P078A03P078A091F1_057.ab1   384 
  407  C BE495175At01P078A03P078A091R1_057.ab1   279 
  435    BE495175At01P078A03P078A091F1_057.ab1   424 
  439  C BE495175At01P078A03P078A091R1_057.ab1   247 
  475    BE495175At01P078A03P078A091F1_057.ab1   464 
  479  C BE495175At01P078A03P078A091R1_057.ab1   207 
  491    BE495175At01P078A03P078A091F1_057.ab1   480 
  495  C BE495175At01P078A03P078A091R1_057.ab1   191 
  507    BE495175At01P078A03P078A091F1_057.ab1   496 
  511  C BE495175At01P078A03P078A091R1_057.ab1   175 
Contig length: old 685, new 685

Contig length: old 685, new 685
New start: 0