No. words: 1506; after pruning: 1452


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.2 (1,1:686)  661  0.73 0.15 0.00  BE495175Ld06P078A03P078A091F1_095.ab1        1   687 (69)  C BE495175Ld06P078A03P078A091R1_095.ab1   (62)   688     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  330 nodes

 167 str. conn. components

Path
    1  C BE495175Ld06P078A03P078A091R1_095.ab1   750 
   66    BE495175Ld06P078A03P078A091F1_095.ab1     4 
   89  C BE495175Ld06P078A03P078A091R1_095.ab1   661 
   98    BE495175Ld06P078A03P078A091F1_095.ab1    36 
  134  C BE495175Ld06P078A03P078A091R1_095.ab1   616 
  138    BE495175Ld06P078A03P078A091F1_095.ab1    76 
  142  C BE495175Ld06P078A03P078A091R1_095.ab1   608 
  146    BE495175Ld06P078A03P078A091F1_095.ab1    84 
  355  C BE495175Ld06P078A03P078A091R1_095.ab1   395 
  395    BE495175Ld06P078A03P078A091F1_095.ab1   333 
  459  C BE495175Ld06P078A03P078A091R1_095.ab1   291 
  663    BE495175Ld06P078A03P078A091F1_095.ab1   601 
  667  C BE495175Ld06P078A03P078A091R1_095.ab1    83 
  675    BE495175Ld06P078A03P078A091F1_095.ab1   613 
  679  C BE495175Ld06P078A03P078A091R1_095.ab1    71 
  695    BE495175Ld06P078A03P078A091F1_095.ab1   633 
  703  C BE495175Ld06P078A03P078A091R1_095.ab1    47 
  711    BE495175Ld06P078A03P078A091F1_095.ab1   649 
  715  C BE495175Ld06P078A03P078A091R1_095.ab1    35 
  723    BE495175Ld06P078A03P078A091F1_095.ab1   661 
  727  C BE495175Ld06P078A03P078A091R1_095.ab1    23 
  741    BE495175Ld06P078A03P078A091F1_095.ab1   679 
Contig length: old 819, new 818

Contig length: old 818, new 818
New start: 0