No. words: 1472; after pruning: 1446


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.5 (1,1:688)  659  0.44 0.00 0.29  BE495175Ld07P078A03P078A091F1_093.ab1        3   689 (55)  C BE495175Ld07P078A03P078A091R1_093.ab1   (43)   685     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  334 nodes

 169 str. conn. components

Path
    1  C BE495175Ld07P078A03P078A091R1_093.ab1   728 
   47    BE495175Ld07P078A03P078A091F1_093.ab1     6 
  142  C BE495175Ld07P078A03P078A091R1_093.ab1   588 
  154    BE495175Ld07P078A03P078A091F1_093.ab1   113 
  442  C BE495175Ld07P078A03P078A091R1_093.ab1   288 
  694    BE495175Ld07P078A03P078A091F1_093.ab1   653 
  698  C BE495175Ld07P078A03P078A091R1_093.ab1    32 
  726    BE495175Ld07P078A03P078A091F1_093.ab1   686 
Contig length: old 783, new 784

Contig length: old 784, new 784
New start: 0 
D Change at: 75; seg lengths: entry 3, contig 4
I Change at: 710; seg lengths: entry 1, contig 0