No. words: 1201; after pruning: 1161


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.1 (1,1:686)  503  0.58 0.00 0.00  BE495175Ld09P078A03P078A091F1_089.ab1       92   605 (0)  C BE495175Ld09P078A03P078A091R1_089.ab1   (0)   596    83 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  250 nodes

 127 str. conn. components

Path
    1    BE495175Ld09P078A03P078A091F1_089.ab1     1 
  320  C BE495175Ld09P078A03P078A091R1_089.ab1   368 
  324    BE495175Ld09P078A03P078A091F1_089.ab1   324 
  360  C BE495175Ld09P078A03P078A091R1_089.ab1   328 
  364    BE495175Ld09P078A03P078A091F1_089.ab1   364 
  476  C BE495175Ld09P078A03P078A091R1_089.ab1   212 
  480    BE495175Ld09P078A03P078A091F1_089.ab1   480 
  492  C BE495175Ld09P078A03P078A091R1_089.ab1   196 
  528    BE495175Ld09P078A03P078A091F1_089.ab1   528 
  544  C BE495175Ld09P078A03P078A091R1_089.ab1   144 
  552    BE495175Ld09P078A03P078A091F1_089.ab1   552 
  556  C BE495175Ld09P078A03P078A091R1_089.ab1   132 
  568    BE495175Ld09P078A03P078A091F1_089.ab1   568 
  576  C BE495175Ld09P078A03P078A091R1_089.ab1   112 
Contig length: old 687, new 687

Contig length: old 687, new 687
New start: 0