No. words: 1088; after pruning: 1062


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 8.3 (1,1:500)  483  0.20 0.00 0.20  BE495175Sn25P095B07P078A091F1_033.ab1        4   500 (52)  C BE495175Sn25P095B07P078A091R1_033.ab1   (39)   497     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE495175Sn25P095B07P078A091R1_033.ab1   536 
  187    BE495175Sn25P095B07P078A091F1_033.ab1   151 
  231  C BE495175Sn25P095B07P078A091R1_033.ab1   306 
  275    BE495175Sn25P095B07P078A091F1_033.ab1   239 
  287  C BE495175Sn25P095B07P078A091R1_033.ab1   250 
  331    BE495175Sn25P095B07P078A091F1_033.ab1   295 
  359  C BE495175Sn25P095B07P078A091R1_033.ab1   178 
  375    BE495175Sn25P095B07P078A091F1_033.ab1   339 
  443  C BE495175Sn25P095B07P078A091R1_033.ab1    94 
  467    BE495175Sn25P095B07P078A091F1_033.ab1   431 
Contig length: old 587, new 588

Contig length: old 588, new 588
New start: 0