No. words: 1314; after pruning: 1288


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:614)  597  0.33 0.00 0.16  BE495175Sn25P095H06P078A091F1_087.ab1        1   615 (38)  C BE495175Sn25P095H06P078A091R1_087.ab1   (47)   614     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C BE495175Sn25P095H06P078A091R1_087.ab1   661 
  174    BE495175Sn25P095H06P078A091F1_087.ab1   127 
  178  C BE495175Sn25P095H06P078A091R1_087.ab1   484 
  510    BE495175Sn25P095H06P078A091F1_087.ab1   463 
  518  C BE495175Sn25P095H06P078A091R1_087.ab1   144 
  566    BE495175Sn25P095H06P078A091F1_087.ab1   519 
  582  C BE495175Sn25P095H06P078A091R1_087.ab1    80 
  602    BE495175Sn25P095H06P078A091F1_087.ab1   555 
  610  C BE495175Sn25P095H06P078A091R1_087.ab1    52 
  626    BE495175Sn25P095H06P078A091F1_087.ab1   579 
  638  C BE495175Sn25P095H06P078A091R1_087.ab1    24 
  642    BE495175Sn25P095H06P078A091F1_087.ab1   595 
Contig length: old 699, new 700

Contig length: old 700, new 700
New start: 0