No. words: 1124; after pruning: 1098


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 9.1 (1,1:520)  507  0.00 0.00 0.19  BE495175Sn27P095G06P078A091F1_053.ab1        2   520 (46)  C BE495175Sn27P095G06P078A091R1_053.ab1   (39)   519     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1  C BE495175Sn27P095G06P078A091R1_053.ab1   558 
   79    BE495175Sn27P095G06P078A091F1_053.ab1    41 
   83  C BE495175Sn27P095G06P078A091R1_053.ab1   476 
  415    BE495175Sn27P095G06P078A091F1_053.ab1   377 
Contig length: old 603, new 604

Contig length: old 604, new 604
New start: 0